Faculty of Natural
Sciences
Comenius University Bratislava

PUBLICATIONS

2021

 1.      Boršová, K., Paul, E.D., Kováčová, V., Radvanszka, M., Hajdu, R., Čabanová, V., Sláviková, M., Ličková, M., Lukáčiková, Ľ., Belák, A., Roussier, L., Kostičová, M., Líšková, A., Maďarová, L., Štefkovičová, M., Reizigová, L., Nováková, E., Sabaka, P., Koščálová, A., Brejová, B., Vinař, T., Nosek, J., Čekan, P., Klempa, B. (2021) Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia using a novel, multiplexed RT-qPCR assay: a diagnostic accuracy and surveillance study. Scientific Reports 11: 20494. https://doi.org/10.1038/s41598-021-99661-7

2.      Brejová, B., Boršová, K., Hodorová, V., Čabanová, V., Gafurov, A., Fričová, D., Neboháčová, M., Vinař, T., Klempa, B., Nosek, J. (2021) Nanopore Sequencing of SARS-CoV-2: Comparison of Short and Long PCR-tiling Amplicon Protocols. PLoS ONE 16(10): e0259277. https://doi.org/10.1371/journal.pone.0259277

3.      Brejová, B., Boršová, K., Hodorová, V., Čabanová, V., Reizigová, L., Paul, E.D., Čekan, P., Klempa, B., Nosek, J., Vinař, T. (2021) A SARS-CoV-2 mutant from B.1.258 lineage with ∆H69/∆V70 deletion in the Spike protein circulating in Central Europe in the fall 2020. Virus Genes (in press). https://doi.org/10.1007/s11262-021-01866-5

4.      Červenák, F., Sepšiová, R., Nosek, J., Tomáška, Ľ. (2021) Step-by-step evolution of telomeres: lessons from yeasts. Genome Biology an Evolution 13(2): evaa268. https://doi.org/10.1093/gbe/evaa268

5.      Frankovský, J., Keresztesová, B., Bellová, J., Kunová, N., Čanigová, N., Hanáková, K., Bauer, J.A., Ondrovičová, G., Lukáčová, V., Siváková, B., Zdrahal, Z., Pevala, V., Procházková, K., Nosek, J., Baráth, P., Kutejová, E., Tomáška, Ľ. (2021) The yeast mitochondrial succinylome: Implications for regulation of mitochondrial nucleoids. Journal of Biological Chemistry 297(4): 101155. https://doi.org/10.1016/j.jbc.2021.101155

6.      Frankovský, J., Vozáriková, V., Nosek, J., Tomáška, Ľ. (2021) Mitochondrial protein phosphorylation in yeast revisited. Mitochondrion 57: 148-162. https://doi.org/10.1016/j.mito.2020.12.016

7.      Mentel, M., Chovančíková, P., Zeman, I., Polčic, P. (2021) Learning from Yeast about Mitochondrial Carriers. Microorganisms, 9(10): 2044. https://doi.org/10.3390/microorganisms9102044

8.      Mixão, V., Hegedűsová, E., Saus, E., Pryszcz, L.P., Cillingová, A., Nosek, J., Gabaldón, T. (2021) Genome analysis of Candida subhashii reveals its hybrid nature and dual mitochondrial genome conformation. DNA Research 28(3): dsab006. https://doi.org/10.1093/dnares/dsab006

9.      Monakhova, N., Korduláková, J., Vocat, A., Egorova, A., Lepioshkin, A., Salina, E., Nosek, J., Repková, E., Zemanová, J., Jurdáková, H., Górová, R., Roh, J., Degiacomi, G., Sammartino, J.C., Pasca, M.R., Cole, S., Mikušová, K., Makarov, V. (2021) Novel pyrano[3,2-b]indolones: design, synthesis and antimycobacterial activity. ACS Infectious Diseases 7(1): 88-100. https://doi.org/10.1021/acsinfecdis.0c00622

10.   Schikora-Tamarit, M.A., Marcet-Houben, M., Nosek, J., Gabaldón, T. (2021) Shared evolutionary footprints suggest mitochondrial oxidative damage underlies multiple Complex I losses. Open Biology 11: 200362. https://doi.org/10.1098/rsob.200362

11.   Vrzoňová, R., Tóth, R., Siváková, B., Moťovská, A., Gaplovská, K., Baráth, P., Tomáška, Ľ., Gácser, A., Gabaldón, T., Nosek, J., Neboháčová, M. (2021) OCT1 - a yeast mitochondrial thiolase involved in the 3-oxoadipate pathway. FEMS Yeast Research 21(5): foab034. https://doi.org/10.1093/femsyr/foab034

2020

1.     Tomáška, Ľ., Nosek, J. (2020) Co-evolution in the jungle: From leafcutter ant colonies to chromosomal ends. Journal of Molecular Evolution 88(4): 293-318. https://doi.org/10.1007/s00239-020-09935-3

2.     Juríková, K., Gajarský, M., Hajikazemi, M., Nosek, J., Procházková, K., Paeschke, K., Trantírek, L., Tomáška, Ľ. (2020) Role of folding kinetics of secondary structures in telomeric G-overhangs in the regulation of telomere maintenance in Saccharomyces cerevisiae. Journal of Biological Chemistry 295(27): 8958-8971. https://doi.org/10.1074/jbc.RA120.012914

3.     Vozáriková, V., Kunová, N., Bauer, J.A., Frankovský, J., Kotrasová, V., Procházková, K., Džugasová, V., Kutejová, E., Pevala, V., Nosek, J., Tomáška, Ľ. (2020) Mitochondrial HMG-box containing proteins: From biochemical properties to the roles in human diseases. Biomolecules 10:1193. https://doi.org/10.3390/biom10081193

2019

1. Tomáška, Ľ., Nosek, J., Sepšiová, R., Červenák, F., Juríková, K., Procházková, K., Neboháčová, M., Willcox, S., Griffith, J.D. (2019) Commentary: Single-stranded telomere-binding protein employs a dual rheostat for binding affinity and specificity that drives function. Frontiers in Genetics 9: article no. 742. https://doi.org/10.3389/fgene.2018.00742

2. Brejová, B., Lichancová, H., Brázdovič, F., Hegedűsová, E., Forgáčová Jakúbková, M., Hodorová, V., Džugasová, V., Baláž, A., Zeiselová, L., Cillingová, A., Neboháčová, M., Raclavský, V., Tomáška, Ľ., Lang, B.F., Vinař, T., Nosek, J. (2019) Genome sequence of the opportunistic human pathogen Magnusiomyces capitatus. Current Genetics 65(2): 539-560.https://doi.org/10.1007/s00294-018-0904-y

3. Tóth, R., Nosek, J., Mora-Montes, H.M., Gabaldón, T., Bliss, J.M., Nosanchuk, J.D., Turner, S.A., Butler, G., Vágvölgyi, C., Gácser, A. (2019) Candida parapsilosis: from genes to the bedside. Clinical Microbiology Reviews 32(2): e00111-18. https://doi.org/10.1128/CMR.00111-18

4. Lichancová, H., Hodorová, V., Sienkiewicz, K., Penir, S.M.U., Afanasyev, P., Boceck, D., Bonnin, S., Hakobyan, S., Krawczyk, P.S., Smyczynska, U., Zhivkoplias, E., Zlatohurska, M., Odrzywolski, A., Tralle, E., Frolova, A., Pryszcz, L.P., Brejová,B., Vinař, T., Nosek, J. (2019) Genome Sequence of Flavor-Producing Yeast Saprochaete suaveolens NRRL Y-17571. Microbiology Resource Announcements 8(9): e00094-19. https://doi.org/10.1128/MRA.00094-19

5. Brejová, B., Lichancová, H., Hodorová, V., Neboháčová, M., Tomáška, Ľ., Vinař, T., Nosek, J. (2019) Genome Sequence of an Arthroconidial Yeast Saprochaete fungicola CBS 625.85. Microbiology Resource Announcements 8(15): e00092-19.https://doi.org/10.1128/MRA.00092-19

6. Tomáška, Ľ., Nosek, J., Kar, A., Willcox, S., Griffith, J.D. (2019) A new view of the t-loop junction: implications for self-primed telomere extension, expansion of disease-related nucleotide repeat blocks, and telomere evolution. Frontiers in Genetics 10: article no. 792. https://doi.org/10.3389/fgene.2019.00792

7. Červenák, F., Juríková, K., Devillers, H., Kaffe, B., Khatib, A., Bonnell, E., Sopkovičová, M., Wellinger, R.J., Nosek, J., Tzfati, Y., Neuvéglise, C., Tomáška, Ľ. (2019) Identification of telomerase RNAs in species of the Yarrowia clade provides insights into the co-evolution of telomerase, telomeric repeats and telomere-binding proteins. Scientific Reports (in press).

8.     Hodorová, V., Lichancová, H., Zubenko, S., Sienkiewicz, K., Penir, S.M.U., Afanasyev, P., Boceck, D., Bonnin, S., Hakobyan, S., Smyczynska, U., Zhivkoplias, E., Zlatohurska, M., Tralle, E., Frolova, A., Pryszcz, L.P., Brejová, B., Vinař, T., Nosek, J. (2019) Genome Sequence of the Yeast Saprochaete ingens CBS 517.90. Microbiology Resource Announcements 8(50): e01366-19.  https://doi.org/10.1128/MRA.01366-19

2018

1. Tomáška, Ľ., Nosek, J. (2018) Ten Simple Rules for Writing a Cover Letter to Accompany a Job Application for an Academic Position. PLOS Computational Biology 14(5): e1006132. https://doi.org/10.1371/journal.pcbi.1006132

2017

1.     Brejová, B., Lichancová, H., Brázdovič, F., Cillingová, A., Neboháčová, M., Tomáška, Ľ., Vinař, T., and Nosek, J. (2017) Draft Genome Sequence of an obligate psychrophilic yeast Candida psychrophila NRRL Y-17665T. Genome Announcements 5(35): e00851-17. Doi.org/10.1128/genomea.00851-17

2.     Cillingová, A., Zeman, I., Tóth, R., Neboháčová, M., Dunčková, I., Hölcová, M., Jakúbková, M., Gérecová, G., Pryszcz, L.P., Tomáška, Ľ., Gabaldón, T., Gácser, A., and Nosek, J. (2017) Eukaryotic transporters for hydroxyderivatives of benzoic acid. Scientific Reports 7(1): 8998. Doi.org/10.1038/s41598-017-09408-6

3.     Červenák, F., Juríková, K., Sepšiová, R., Neboháčová, M., Nosek, J., and Tomáška, Ľ. (2017) Double-stranded telomeric DNA binding proteins: Diversity matters. Cell Cycle 16(17): 1568-1577. Doi.org/10.1080/15384101.2017.1356511

2016

 1.     Bakkaiová, J., Marini, V., Willcox, S., Nosek, J., Griffith, J.D., Krejčí, L., and Tomáška, Ľ. (2016) Yeast mitochondrial HMG proteins: DNA-binding properties of the most evolutionarily divergent component of mitochondrial nucleoids. Bioscience Reports 36(1): e00288. Doi.org/10.1042/bsr20150275

2.     Jakúbková, M., Džugasová, V., Truban, D., Abelovská, L., Bhatia-Kiššová, I., Valachovič, M., Klobučníková, V., Zeiselová, L., Griač, P., Nosek, J., and Tomáška, Ľ. (2016) Identification of mutants exhibiting altered sensitivity to valinomycin and nigericin demonstrate pleiotropic effects of ionophores on cellular processes. PLoS One 11(10): e0164175. Doi.org/10.1371/journal.pone.0164175

3.     Pevala, V., Truban, D., Bauer, J.A., Košťan, J., Kunová, N., Bellová, J., Brandstetter, M., Marini, V., Krejčí, L., Tomáška, Ľ., Nosek, J., and Kutejová, E. (2016) The structure and DNA-binding properties of Mgm101 from a yeast with a linear mitochondrial genome. Nucleic Acids Research 44(5): 2227-2239. Doi.org/10.1093/nar/gkv1529

4.     Rendeková, J., Ward, T.A., Šimoničová, L., Thomas, P.H., Nosek, J., Tomáška, Ľ., McHugh, P.J., and Chovanec, M. (2016) Mgm101: A double-duty Rad52-like protein. Cell Cycle 15(23): 3169-3176. Doi.org/10.1080/15384101.2016.1231288

5.     Sepšiová, R., Nečasová, I., Willcox, S., Procházková, K., Gorilák, P., Nosek, J., Hofr, C., Griffith, J.D., and Tomáška, Ľ. (2016) Evolution of telomeres in Schizosaccharomyces pombe and its possible relationship to the diversification of telomere binding proteins. PLoS One 11(4): e0154225. Doi.org/10.1371/journal.pone.0154225

6.     Zeman, I., Neboháčová, M., Gérecová, G., Katonová, K., Jánošíková, E., Jakúbková, M., Centárová, I., Dunčková, I., Tomáška, Ľ., Pryszcz, L.P., Gabaldón, T., and Nosek, J. (2016) Mitochondrial carriers link the catabolism of hydroxyaromatic compounds to the central metabolism in Candida parapsilosis. G3: Genes, Genomes, Genetics (Bethesda) 6(12): 4047-4058. Doi.org/10.1534/g3.116.034389

2015

 1.     Gérecová, G., Neboháčová, M., Zeman, I., Pryszcz, L.P., Tomáška, Ľ., Gabaldón, T., and Nosek, J. (2015) Metabolic gene clusters encoding the enzymes of two branches of the 3-oxoadipate pathway in the pathogenic yeast Candida albicans. FEMS Yeast Research 15(3): fov006. Doi.org/10.1093/femsyr/fov006

2.     Ivan, B., Lajdová, D., Abelovská, L., Balážová, M., Nosek, J., and Tomáška, Ľ. (2015) Mdm31 protein mediates sensitivity to potassium ionophores but does not regulate mitochondrial morphology or phospholipid trafficking in Schizosaccharomyces pombe. Yeast 32(3): 345-354. Doi.org/10.1002/yea.3062

3.     Nosek, J., Tomáška, Ľ., Burger, G., and Lang, B.F. (2015) Programmed translational bypassing elements in mitochondria: structure, mobility and evolutionary origin. Trends in Genetics 31(4): 187-194. Doi.org/10.1016/j.tig.2015.02.010

4.     Pryszcz, L.P., Németh, T., Saus, E., Ksiezopolska, E., Hegedűsová, E., Nosek, J., Wolfe, K.H., Gacser, A., and Gabaldón, T. (2015) The genomic aftermath of hybridization in the opportunistic pathogen Candida metapsilosis. PLoS Genetics 11(10): e1005626. Doi.org/10.1371/journal.pgen.1005626

5.     Šimoničová, L., Dudeková, H., Ferenc, J., Procházková, K., Neboháčová, M., Dušinský, R., Nosek, J., and Tomáška, Ľ. (2015) Saccharomyces cerevisiae as a model for the study of extranuclear functions of mammalian telomerase. Current Genetics 61(4): 517-527. Doi.org/10.1007/s00294-014-0472-8

2014

 1.     Bakkaiová, J., Arata, K., Matsunobu, M., Ono, B., Aoki, T., Lajdová, D., Neboháčová, M., Nosek, J., Miyakawa, I., and Tomáška, Ľ. (2014) A strictly aerobic yeast Yarrowia lipolytica tolerates a loss of a mitochondrial DNA-packaging protein. Eukaryotic Cell 13(9): 1143-1157. Doi.org/10.1128/ec.00092-14

2.     Gerhold, J.M., Sedman, T., Višacká, K., Slezáková, J., Tomáška, Ľ., Nosek, J., and Sedman, J. (2014) Replication intermediates of the linear mitochondrial DNA of Candida parapsilosis suggest a common recombination based mechanism for yeast mitochondria. Journal of Biological Chemistry 289(33): 22659-22670. Doi.org/10.1074/jbc.m114.552828

3.     Hegedűsová, E., Brejová, B., Tomáška, Ľ., Sipiczki, M., and Nosek, J. (2014) Mitochondrial genome of the basidiomycetous yeast Jaminaea angkorensis. Current Genetics 60(1): 49-59. Doi.org/10.1007/s00294-013-0410-1

4.     Kollár, R., Boďová, K., Nosek, J., and Tomáška, Ľ. (2014) Mathematical model of alternative mechanism of telomere length maintenance. Physical Review E 89(3): 032701. Doi.org/10.1103/physreve.89.032701

5.     Lang, B.F., Jakúbková, M., Hegedűsová, E., Daoud, R., Forget, L., Brejová, B., Vinař, T., Kosa, P., Fričová, D., Neboháčová, M., Griač, P., Tomáška, Ľ., Burger, G., and Nosek, J. (2014) Massive programmed translational jumping in mitochondria. Proceedings of the National Academy of Sciences of the United States of America 111(16): 5926-5931. Doi.org/10.1073/pnas.1322190111

6.     Nosek, J. and Tomáška, Ľ. (2014) Timing of meiosis: Microtubules on the move. Cell Cycle 13(1): 13. Doi.org/10.4161/cc.27298

2013

 1.     Hapala, I., Griač, P., Nosek, J., Sychrová, H., and Tomáška, Ľ. (2013) Yeast membranes and cell wall: From basics to applications. Current Genetics 59(4): 167-169.
Doi.org/10.1007/s00294-013-0408-8

2.     Nosek, J., Brejová, B., Neboháčová, M., Baráth, P., Bhatia-Kiššová, I., Kollár, R., Valent, I., Tomáška, Ľ. (2013) Genomika. CreateSpace Independent Publishing Platform, Charleston, SC, USA [ISBN-13 978-1493731336] 276 p.

3.     Nosek, J., Tomáška, Ľ. (2013) Laboratory Protocols in Molecular and Cell Biology of Yeasts. CreateSpace Independent Publishing Platform, Charleston, SC, USA [ISBN-13: 978-1492877684] 182 p. 

2012

 1.     Nosek, J. and Tomáška, Ľ. (2012) A new tool for an old problem: Synchronizing fission yeast cells during meiosis using an ATP analog-sensitive protein kinase. Cell Cycle 11(9): 1755-1756. Doi.org/10.4161/cc.20314

2.     Valach, M., Pryszcz, L.P., Tomáška, Ľ., Gacser, A., Gabaldón, T., and Nosek, J. (2012) Mitochondrial genome variability within the Candida parapsilosis species complex. Mitochondrion 12(5): 514–519. Doi.org/10.1016/j.mito.2012.07.109

3.     Višacká, K., Hofr, C., Willcox, S., Nečasová, I., Pavlousková, J., Sepšiová, R., Wimmerová, M., Šimoničová, L., Nosek, J., Fajkus, J., Griffith, J.D., and Tomáška, Ľ. (2012) Synergism of the two Myb domains of Tay1 protein results in high-affinity binding to telomeres. Journal of Biological Chemistry 287(38): 32206-32215. Doi.org/10.1074/jbc.m112.385591

4.     Babot, M., Blancard, C., Zeman, I., Lauquin, G.J.M., and Trézéguet, V. (2012) Mitochondrial ADP/ATP carrier: preventing conformational changes by point mutations inactivates nucleotide transport activity. Biochemistry 51(37): 7348–7356. Doi.org/10.1021/bi300978z

2011

 1.     Valach, M., Farkas, Z., Fričová, D., Kováč, J., Brejová, B., Vinař, T., Pfeiffer, I., Kucsera, J., Tomáška, Ľ., Lang, B.F., and Nosek, J. (2011) Evolution of linear chromosomes and multipartite genomes in yeast mitochondria. Nucleic Acids Research 39(10): 4202-4219. Doi.org/10.1093/nar/gkq1345

2.     Holešová, Z., Jakúbková, M., Zavadiaková, I., Zeman, I., Tomáška, Ľ., and Nosek, J. (2011) Gentisate and 3-oxoadipate pathways in the yeast Candida parapsilosis: Identification and functional analysis of the genes coding for 3-hydroxybenzoate 6-hydroxylase and 4-hydroxybenzoate 1-hydroxylase. Microbiology-SGM 157(7): 2152-2163. Doi.org/10.1099/mic.0.048215-0

3.     Juhásová, B., Mentel, M., Bhatia-Kiššová, I., Zeman, I., Kolarov, J., Forte, M., and Polčic, P. (2011) BH3-only protein Bim inhibits activity of antiapoptotic members of Bcl-2 family when expressed in yeast. FEBS Letters 585(17): 2709–2713. Doi.org/10.1016/j.febslet.2011.07.027

2010

1.     Fričová, D., Valach, M., Farkas, Z., Pfeiffer, I., Kucsera, J., Tomáška, Ľ., and Nosek, J. (2010) The mitochondrial genome of the pathogenic yeast Candida subhashii: GC-rich linear DNA with a protein covalently attached to the 5' termini. Microbiology-SGM 156(7): 2153-2163. Doi.org/10.1099/mic.0.038646-0

2.     Gunišová, S., Bartošová, Z., Kramara, J., Nosek, J., and Tomáška, Ľ. (2010) Formation of C-terminally truncated version of the Taz1 protein employs cleavage-box structure in mRNA. Biochemical and Biophysical Research Communications 392: 391-396. Doi.org/10.1016/j.bbrc.2010.01.033

3.     Kinský, S., Miháliková, A., Kramara, J., Nosek, J., and Tomáška, Ľ. (2010) Lack of the catalytic subunit of telomerase leads to growth defects accompanied by structural changes at the chromosomal ends in Yarrowia lipolytica. Current Genetics 56: 413-425.
Doi.org/10.1007/s00294-010-0310-6

4.     Kramara, J., Willcox, S., Gunišová, S., Kinský, S., Nosek, J., Griffith, J.D., and Tomáška, Ľ. (2010) Tay1 protein: A novel telomere-binding factor from Yarrowia lipolytica. Journal of Biological Chemistry 285(49): 38078-38092. Doi.org/10.1074/jbc.m110.127605

5.     Šubr, Z.W., Kamencayová, M., Nováková, S., Nagyová, A., Nosek, J., and Glasa, M. (2010) A single amino acid maps the capsid protein electrophoretic double-band phenotype of the Plum pox virus strain PPV-Rec. Archives of Virology 155(7): 1151-1155. Doi.org/10.1007/s00705-010-0677-1

6.     Tomáška, Ľ. and Nosek, J. (2010) Filling out the gaps is the hardest (yet rewarding) task: The genome-wide collection of the fission yeast deletion mutants is near completion. Cell Cycle 9(12): 2274. Doi.org/10.4161/cc.9.12.12027

7.     Laco, J., Zeman, I., Pevala, V., Polčic, P., and Kolarov, J. (2010) Adenine nucleotide transport via Sal1 carrier compensates for the essential function of the mitochondrial ADP/ATP carrier. FEMS Yeast Research 10(3): 290-296. Doi.org/10.1111/j.1567-1364.2010.00606.x

2009

1.     Gunišová, S., Elboher, E., Nosek, J., Gorkovoy, V., Brown, Y., Lucier, J.-F., Laterreur, N., Wellinger, R.J., Tzfati, Y., and Tomáška, Ľ. (2009) Identification and comparative analysis of telomerase RNAs from Candida species reveal conservation of functional elements. RNA 15(4): 546-559. Doi.org/10.1261/rna.1194009

2.     Miyakawa, I., Okamura, A., Kinský, S., Višacká, K., Tomáška, Ľ., and Nosek, J. (2009) Mitochondrial nucleoids from the yeast Candida parapsilosis: Expansion of the repertoire of proteins associated with mitochondrial DNA. Microbiology-SGM 155(5): 1558-1568. Doi.org/10.1099/mic.0.027474-0

3.     Neboháčová, M., Kim, C.E., Simpson, L., and Maslov, D.A. (2009) RNA editing and mitochondrial activity in promastigotes and amastigotes of Leishmania donovani. International Journal for Parasitolology 39: 635-644. Doi.org/10.1016/j.ijpara.2008.10.015

4.     Nosek, J., Holešová, Z., Kosa, P., Gacser, A., and Tomáška, Ľ. (2009) Biology and genetics of the pathogenic yeast Candida parapsilosis. Current Genetics 55: 497-509.
Doi.org/10.1007/s00294-009-0268-4

5.     Tomáška, Ľ. and Nosek, J. (2009) Telomere heterogeneity: Taking advantage of stochastic events. FEBS Letters 583: 1067-1071. Doi.org/10.1016/j.febslet.2009.02.032

6.     Tomáška, Ľ., Nosek, J., Kramara, J., and Griffith, J.D. (2009) Telomeric circles: universal players in telomere maintenance? Nature Structural & Molecular Biology 16(10): 1010-1015. Doi.org/10.1038/nsmb.1660

7.     Višacká, K., Gerhold, J.M., Petrovičová, J., Kinský, S., Jõers, P., Nosek, J., Sedman, J., and Tomáška, Ľ. (2009) Novel subfamily of mitochondrial HMG-box containing proteins: Functional analysis of Gcf1p from Candida albicans. Microbiology-SGM 155(4): 1226-1240. Doi.org/10.1099/mic.0.025759-0

8.     Wang, S.S., Martin, L.J., Schadt, E.E., Meng, H., Wang, X., Zhao, W., Ingram-Drake, L., Neboháčová, M., Mehrabian, M., Drake, T.A., and Lusis, A.J. (2009) Disruption of the aortic elastic lamina and medial calcification share genetic determinants in mice. Circulation: Cardiovascular Genetics 2: 573-582. 
Doi.org/ 10.1161/CIRCGENETICS.109.860270

2008

1.     Mehrabian, M., Schulthess, F.T., Neboháčová, M., Castellani, L.W., Zhou, Z., Hartiala, J., Oberholzer, J., Lusis, A.J., Maedler, K., and Allayee, H. (2008) Identification of ALOX5 as a gene regulating adiposity and pancreatic function. Diabetologia 51: 978-988. Doi.org/10.1007/s00125-008-1002-3

2.     Steensma, H.Y., Tomáška, L., Reuven, P., Nosek, J., and Brandt, R. (2008) Disruption of genes encoding pyruvate dehydrogenase kinases leads to retarded growth on acetate and ethanol in Saccharomyces cerevisiae. Yeast 25(1): 9-19. Doi.org/10.1002/yea.1543

3.     Valach, M., Tomáška, Ľ., and Nosek, J. (2008) Preparation of yeast mitochondrial DNA for direct sequence analysis. Current Genetics 54(2): 105-109. Doi.org/10.1007/s00294-008-0200-3

2007

1.     Abelovská, L., Bujdoš, M., Kubová, J., Petrezsélyová, S., Nosek, J., and Tomáška, Ľ. (2007) Comparison of elements contents between minimal and complex yeast media. Canadian Journal of Microbiology 53: 533-535.
Doi.org/10.1139/w07-012

2.     Kosa, P., Gavenčiaková, B., and Nosek, J. (2007) Development of a set of plasmid vectors for genetic manipulations of the pathogenic yeast Candida parapsilosis. Gene 396(2): 338-345. Doi.org/10.1016/j.gene.2007.04.008

2006

1.     Kosa, P., Valach, M., Tomáška, Ľ., Wolfe, K.H, and Nosek, J. (2006) Complete DNA sequences of the mitochondrial genomes of the pathogenic yeasts Candida orthopsilosis and Candida metapsilosis: Insight into the evolution of linear DNA genomes from mitochondrial telomere mutants. Nucleic Acids Research 34 (8): 2472-2481. Doi.org/10.1093/nar/gkl327

2.     Nosek, J., Kosa, P., and Tomáška, Ľ. (2006) On the origin of telomeres: A glimpse at the pre-telomerase world. BioEssays 28: 182-190. Doi.org/10.1002/bies.20355

3.     Nosek, J., Tomáška, Ľ., Bolotin-Fukuhara, M., and Miyakawa, I. (2006) Mitochondrial chromosome structure: An insight from analysis of complete yeast genomes. FEMS Yeast Research 6: 356-370.
Doi.org/10.1111/j.1567-1364.2005.00016.x

2005

1.     Gao, G., Simpson, A.M., Kang, X., Rogers, K., Neboháčová, M., Li, F., and Simpson, L. (2005) Functional complementation of Trypanosoma brucei RNA in vitro editing with recombinant RNA ligase. Proceedings of the National Academy of Sciences of the United States of America 102: 4712-4717. Doi.org/10.1073/pnas.0500553102

2.     Nosek, J., Ryčovská, A., Makhov, A.M., Griffith, J.D., and Tomáška, Ľ. (2005) Amplification of telomeric arrays via rolling-circle mechanism. Journal of Biological Chemistry 280: 10840-10845. Doi.org/10.1074/jbc.m409295200

2004

1.     Naumova, E.S., Naumov, G.I., Nosek, J., and Tomáška, Ľ. (2004) Differentiation of the yeasts Williopsis, Zygowilliopsis and Komagataea by karyotypic and PCR analyses. Systematic and Applied Microbiology 27: 192-197. Doi.org/10.1078/072320204322881817

2.     Neboháčová, M., Maslov, D.A., Falick, A.M., and Simpson, L. (2004) The effect of RNA interference Down-regulation of RNA editing 3'-terminal uridylyl transferase (TUTase) 1 on mitochondrial de novo protein synthesis and stability of respiratory complexes in Trypanosoma brucei. Journal of Biological Chemistry 279: 7819-7825. Doi.org/10.1074/jbc.M311360200

3.     Nelson, R.E., Aphasizheva, I., Falick, A.M., Neboháčová, M., and Simpson, L. (2004) The I-complex in Leishmania tarentolae is an uniquely-structured F(1)-ATPase. Molecular and Biochemical Parasitology 135: 221-224. Doi.org/10.1016/j.molbiopara.2004.02.003

4.     Nosek, J., Novotná, M., Hlavatovičová, Z., Ussery, D.W., Fajkus, J., and Tomáška, Ľ. (2004) Complete DNA sequence of the linear mitochondrial genome of the pathogenic yeast Candida parapsilosis. Molecular Genetics and Genomics 272: 173-180. Doi.org/10.1007/s00438-004-1046-0

5.     Nosek, J., Tomáška, Ľ., and Kucejová, B. (2004) The chromosome end replication: Lessons from mitochondrial genetics. Journal of Applied Biomedicine 2: 71-79.

6.     Ryčovská, A., Valach, M., Tomáška, Ľ., Bolotin-Fukuhara, M., and Nosek, J. (2004) Linear versus circular mitochondrial genomes: Intraspecies variability of mitochondrial genome architecture in Candida parapsilosis. Microbiology-SGM 150: 1571-1580. Doi.org/10.1099/mic.0.26988-0

7.     Tomáška, Ľ., McEachern, M.J., and Nosek, J. (2004) Alternatives to telomerase: Keeping linear chromosomes via telomeric circles. FEBS Letters 567: 142-146. Doi.org/10.1016/j.febslet.2004.04.058

8.     Tomáška, Ľ., Willcox, S., Slezáková, J., Nosek, J., and Griffith, J.D. (2004) Taz1 binding to a fission yeast model telomere: Formation of t-loops and higher order structures. Journal of Biological Chemistry 279: 50764–50772. Doi.org/10.1074/jbc.m409790200

9.     Zemanová, J., Nosek, J., and Tomáška, Ľ. (2004) High efficiency transformation of the pathogenic yeast Candida parapsilosis. Current Genetics 45: 183-186. Doi.org/10.1007/s00294-003-0472-6

10.  Trančíková, A., Weisová, P., Kiššová, I., Zeman, I., and Kolarov, J. (2004) Production of reactive oxygen species and loss of viability in yeast mitochondrial mutants: protective effect of Bcl-xL. FEMS Yeast Res. 5(2): 149-156. Doi.org/10.1016/j.femsyr.2004.06.014

2003

1.     Tomáška, Ľ., Sadovská, J., Nosek, J., and Griffith, J.D. (2003) Yeast telomeres: How to ignore essential double-strand DNA breaks? Journal of Applied Biomedicine 1: 189-198.

2.     Nosek, J. and Tomáška, Ľ. (2003) Mitochondrial genome diversity: Evolution of the molecular architecture and replication strategy. Current Genetics 44: 73-84. Doi.org/10.1007/s00294-003-0426-z

3.     Kováč, L., Nosek, J., and Tomáška, Ľ. (2003) An overlooked riddle of life’s origins: Nucleic acid unzipping. Journal of Molecular Evolution 57: S182-S189. Doi.org/10.1007/s00239-003-0026-z

4.     Zeman I., Schwimmer, C., Postis, V., Brandolin, G., David, C, Trézéguet, V., and Lauquin, G.J.M. (2003) Four mutations in transmembrane domains of the mitochondrial ADP/ATP carrier increase resistance to bongkrekic acid. Journal of Bioenergetics and Biomembranes 35(3): 243-256. Doi.org/10.1023/A:1024611731860          

2002

1.     Horváth, A., Neboháčová, M., Lukeš, J., and Maslov, D.A. (2002) Unusual polypeptide synthesis in the kinetoplast-mitochondria from Leishmania tarentolae. Identification of individual de novo translation products. Journal of Biological Chemistry 277: 7222-7230. Doi.org/10.1074/jbc.M109715200

2.     Kucej, M., Kosa, P., Adamíková, Ľ., and Nosek, J. (2002) Isolation of genes coding for Ade2 and Ura3 homologues from the multinuclear yeast Dipodascus magnusii. Current Genetics 41: 20-24. Doi.org/10.1007/s00294-002-0281-3

3.     Nosek, J. and Tomáška, Ľ. (2002) Mitochondrial telomeres: Alternative solutions to the end-replication problem. In: Krupp, G. and Parwaresch, R. (eds.) Telomeres, telomerases and cancer. Kluwer Academic/Plenum Publishers. 426 pp., [ISBN 978-0-306-47437-9], pp. 396-417. {co-published as Krupp, G. and Parwaresch, R. (eds.) Telomeres and Telomerases: Cancer and Biology. Chapter 28. by Landes Bioscience, 421 pp.}

4.     Nosek, J., Adamíková, Ľ., Zemanová, J., Tomáška, Ľ., Zufferey, R., and Mamoun, C.B. (2002) Genetic manipulation of the pathogenic yeast Candida parapsilosis. Current Genetics 42: 27-35. Doi.org/10.1007/s00294-002-0326-7

5.     Nosek, J., Tomáška, Ľ., Ryčovská, A., and Fukuhara, H. (2002) Mitochondrial telomeres as molecular markers for identification of the opportunistic yeast pathogen Candida parapsilosis. Journal of Clinical Microbiology 40: 1283-1289. Doi.org/10.1128/JCM.40.4.1283-1289.2002

6.     Tomáška, Ľ., Makhov, A.M., Griffith, J.D., and Nosek, J. (2002) t-loops in yeast mitochondria. Mitochondrion 1: 455-459. Doi.org/10.1016/S1567-7249(02)00009-0

2001

1.   Tomáška, Ľ., Makhov, A.M., Nosek, J., Kucejová, B., and Griffith, J.D. (2001) Electron microscopic analysis supports a dual role for the mitochondrial telomere-binding protein of Candida parapsilosis. Journal of Molecular Biology 305: 61-69. Doi.org/10.1006/jmbi.2000.4254

2.    Tomáška, Ľ., Nosek, J., and Kucejová, B. (2001) Mitochondrial single-stranded DNA-binding proteins: In search for new functions. Biological Chemistry 382: 179-186. Doi.org/10.1515/bc.2001.025

2000

1.     Ryčovská, A., Szabo, R., Tomáška, Ľ., and Nosek, J. (2000) The respiratory complex I in yeast: Isolation of a gene NUO51 coding for the nucleotide-binding subunit of NADH:ubiquinone oxidoreductase from obligately aerobic yeast Yarrowia lipolytica. Folia Microbiologica 45: 429-433. Doi.org/10.1007/BF02817616

2.     Tomáška, Ľ., Nosek, J., Makhov, A.M., Pastoráková, A., and Griffith, J.D. (2000) Extragenomic double-stranded DNA circles in yeast with linear mitochondrial genomes: Potential involvement in telomere maintenance. Nucleic Acids Research 28: 4479-4487. Doi.org/10.1093/nar/28.22.4479

3.     Kiššová, I., Polčic, P., Kempná, P., Zeman, I., Šabová, Ľ., and Kolarov, J. (2000) The cytotoxic action of Bax on yeast cells does not require mitochondrial ADP/ATP carrier but may be related to its import to the mitochondria. FEBS Lett. 471(1): 113-118. Doi.org/10.1016/S0014-5793(00)01379-X

1999

1.     Blaisonneau, J., Nosek, J., and Fukuhara, H. (1999) Linear DNA plasmid pPK2 of Pichia kluyveri: Distinction between cytoplasmic and mitochondrial linear plasmids in yeasts. Yeast 15: 781-791.
Doi.org/10.1002/(SICI)1097-0061(19990630)15:9<781::AID-YEA420>3.0.CO;2-0

2.     Neboháčová, M., Mentel., M., Nosek, J., and Kolarov, J. (1999) Isolation and expression of the gene encoding mitochondrial ADP/ATP carrier (AAC) from the pathogenic yeast Candida parapsilosis. Yeast 15: 1237-1242. Doi.org/10.1002/(SICI)1097-0061(19990915)15:12<1237::AID-YEA446>3.0.CO;2-3

3.     Nosek, J., Tomáška, Ľ., Pagáčová, B., and Fukuhara, H. (1999) Mitochondrial telomere-binding protein from Candida parapsilosis suggests an evolutionary adaptation of a nonspecific single-stranded DNA-binding protein. Journal of Biological Chemistry 274: 8850-8857. Doi.org/10.1074/jbc.274.13.8850

4.     Trézéguet, V., Zeman, I., David, C., Lauquin, G.J.M., and Kolarov J. (1999) Expression of the ADP/ATP carrier encoding genes in aerobic yeasts; phenotype of an ADP/ATP carrier deletion mutant of Schizosaccharomyces pombe. Biochimica et Biophysica Acta 1410(3): 229-236. Doi.org/10.1016/S0005-2728(98)00180-7

5.     van Heusden, G.P., Neboháčová, M., Overbeeke, T.L., and Steensma, H.Y. (1999) The Saccharomyces cerevisiae TGL2 gene encodes a protein with lipolytic activity and can complement an Escherichia coli diacylglycerol kinase disruptant. Yeast 14: 225-232. Doi.org/10.1007/BF02816364

1998

1.     Adamíková, Ľ., Griač, P., Tomáška, Ľ., and Nosek, J. (1998) Development of a transformation system for the multinuclear yeast Dipodascus (Endomyces) magnusii. Yeast 14: 805-812.
Doi.org/10.1002/(SICI)1097-0061(19980630)14:9<805::AID-YEA279>3.0.CO;2-8

2.     Nosek, J., Tomáška, Ľ., Fukuhara, H., Suyama, Y., and Kováč, L. (1998) Linear mitochondrial genomes: 30 years down the line. Trends in Genetics 14: 184-188. Doi.org/10.1016/S0168-9525(98)01443-7

1997

1.     Tomáška, Ľ., Nosek, J., and Fukuhara, H. (1997) Identification of a putative mitochondrial telomere-binding protein of the yeast Candida parapsilosis. Journal of Biological Chemistry 272: 3049-3056. Doi.org/10.1074/jbc.272.5.3049

2.     Zeman, I. and Kolarov, J. (1997) Expression of genes coding for ADP/ATP translocator in various yeasts. Folia Microbiologica 42(3): 256-257. Doi.org/10.1007/BF02819001

1996

1.     Neboháčová, M., Nováková, Z., Haviernik, P., Betina, S., and Kolarov, J. (1996) Oxygen- and carbon source-dependent transactivation effect of ABF1 on the expression of the AAC2 gene encoding mitochondrial ADP/ATP carrier. Folia Microbiologica 42(3):115-116 Doi.org/10.1007/BF02816364

1995

1.     Filipp, D., Filipp, P., Nosek, J., and Hladká, M. (1995) Electrophoretic karyotype of Dipodascus (Endomyces) magnusii: Two main intraspecific chromosomal polymorphisms associated with the difference in total genome size. Current Genetics 29: 81-87. Doi.org/10.1007/BF00313197

2.     Nosek, J., Dinouël, N., Kováč, L., and Fukuhara, H. (1995) Linear mitochondrial DNAs from yeasts: Telomeres with large tandem repetitions. Molecular and General Genetics 247: 61-72. Doi.org/10.1007/BF00425822

3.     Tomáška, Ľ. and Nosek, J. (1995) Several polymers enhance the sensitivity of the Southwestern assay. Analytical Biochemistry 227: 387-389. Doi.org/10.1006/abio.1995.1296

1994

1.     Drissi, R., Sor, F., Nosek, J., and Fukuhara, H. (1994) Genes of the linear mitochondrial DNA of Williopsis mrakii: Coding sequences for a maturase-like protein, a ribosomal protein VAR1 homologue, cytochrome oxidase subunit 2 and methionyl tRNA. Yeast 10: 391-398. Doi: 10.1002/yea.320100312

2.     Nosek, J. and Fukuhara, H. (1994) Mitochondrial transfer RNA genes of the yeast Candida parapsilosis. Gene 142: 307-308.
Doi.org/10.1016/0378-1119(94)90280-1

3.     Nosek, J. and Fukuhara, H. (1994) NADH dehydrogenase subunit genes in the mitochondrial DNA of yeasts. Journal of Bacteriology 176: 5622-5630. Doi.org/10.1128/jb.176.18.5622-5630.1994

1993

1.     Griač, P. and Nosek, J. (1993) Mitochondrial DNA of Endomyces (Dipodascus) magnusii. Current Genetics 23: 549-552. Doi.org/10.1007/BF00312651

2.     Nosek, J., Filipp, D., Bederková, K., and Griač, P. (1993) Isolation of a dsRNA virus from Dipodascus (Endomyces) magnusii. Current Genetics 23: 219-222. Doi.org/10.1007/BF00351499

3.     Šabová, Ľ., Zeman, I., Supek, F., and Kolarov, J. (1993) Transcriptional control of AAC3 gene encoding mitochondrial ADP/ATP translocator in Saccharomyces cerevisiae by oxygen, heme and ROX1 factor. European Journal of Biochemistry 213(1): 547-553. 
Doi: 10.1111/j.1432-1033.1993.tb17793.x